Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type biogenesis protein ccme | SAMN05421512_102348 | Not Available | Negative | 965541 - 965978 | 15671.0 |
| cytochrome c-type biogenesis protein ccmh | SAMN05421512_102349 | Not Available | Negative | 966019 - 967182 | 40962.6 |
| hypothetical protein | SAMN05421512_102350 | Not Available | Negative | 967310 - 968725 | 52341.1 |
| surface antigen | SAMN05421512_102351 | Not Available | Negative | 968886 - 969338 | 15247.1 |
| signal transduction histidine kinase | SAMN05421512_102352 | Not Available | Negative | 969554 - 970987 | 51084.8 |
| hypothetical protein | SAMN05421512_102376 | Not Available | Negative | 987958 - 988719 | 26129.8 |
| hypothetical protein | SAMN05421512_102377 | Not Available | Negative | 989943 - 990479 | 19912.1 |
| penicillin-binding protein 1a | SAMN05421512_102378 | Not Available | Positive | 990584 - 992800 | 80387.1 |
| hypothetical protein | SAMN05421512_102379 | Not Available | Positive | 992797 - 993456 | 23608.2 |
| uncharacterized membrane protein | SAMN05421512_102380 | Not Available | Positive | 993453 - 994070 | 21971.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
