Rhizobium etli 8C-3

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium etli 8C-3 is a Gram-negative, rod-shaped bacterium that typically occurs as single cells and is classified as an aerobic organism. This microbe is primarily associated with host organisms, indicating a symbiotic relationship, particularly with certain leguminous plants. The association of R. etli 8C-3 with host plants suggests its potential role in nitrogen fixation, which is a crucial process that enhances soil fertility and promotes plant growth. As an aerobic bacterium, R. etli 8C-3 requires oxygen for its metabolic processes, which aligns with its habitat preferences and symbiotic lifestyle. The specific adaptation to aerobic conditions may facilitate efficient nutrient exchange between the bacterium and its plant host, thereby contributing to the overall health and productivity of the ecosystem in which it resides. Understanding the traits and behaviors of Rhizobium etli 8C-3 provides valuable insights into its role in promoting sustainable agricultural practices, particularly in nitrogen management strategies, which can lead to reduced reliance on chemical fertilizers. This highlights the importance of studying such microorganisms, as they play a significant role in maintaining ecological balance and enhancing agricultural productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium etli
Strain8C-3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Rhizobium etli 8C-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium etli 8C-3 plasmid pRsp8C3a, complete sequence.

Gene Summary

Adenine Count

88856 bp

Thymine Count

89261 bp

Guanine Count

127552 bp

Cytosine Count

124962 bp

Genome Length

430631 bp

Protein-coding Genes

390 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulator transcription factorAM571_RS00175Not AvailableNegative37397 - 3812827307.0
phosphoenolpyruvate carboxykinaseAM571_RS00180Not AvailablePositive38471 - 4008157754.8
alternative ribosome rescue aminoacyl-trna hydrolase arfbAM571_RS00185Not AvailablePositive40175 - 4060915960.3
alpha-ketoglutarate-dependent dioxygenase alkb family proteinAM571_RS00190Not AvailablePositive40611 - 4122222487.2
type i pantothenate kinaseAM571_RS00195Not AvailableNegative41229 - 4222437738.1
phosphoribosyl-atp diphosphataseAM571_RS00200Not AvailableNegative42221 - 4254411497.8
imidazole glycerol phosphate synthase subunit hisfAM571_RS00205Not AvailableNegative42559 - 4334727680.9
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseAM571_RS00210Not AvailableNegative43344 - 4409326404.7
imidazole glycerol phosphate synthase subunit hishAM571_RS00215Not AvailableNegative44124 - 4477423132.8
duf2628 domain-containing proteinAM571_RS00220Not AvailableNegative44774 - 4525917498.1

Displaying genes 2691 – 2700 of 6604 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.