Rhizobium etli 8C-3

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium etli 8C-3 is a Gram-negative, rod-shaped bacterium that typically occurs as single cells and is classified as an aerobic organism. This microbe is primarily associated with host organisms, indicating a symbiotic relationship, particularly with certain leguminous plants. The association of R. etli 8C-3 with host plants suggests its potential role in nitrogen fixation, which is a crucial process that enhances soil fertility and promotes plant growth. As an aerobic bacterium, R. etli 8C-3 requires oxygen for its metabolic processes, which aligns with its habitat preferences and symbiotic lifestyle. The specific adaptation to aerobic conditions may facilitate efficient nutrient exchange between the bacterium and its plant host, thereby contributing to the overall health and productivity of the ecosystem in which it resides. Understanding the traits and behaviors of Rhizobium etli 8C-3 provides valuable insights into its role in promoting sustainable agricultural practices, particularly in nitrogen management strategies, which can lead to reduced reliance on chemical fertilizers. This highlights the importance of studying such microorganisms, as they play a significant role in maintaining ecological balance and enhancing agricultural productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium etli
Strain8C-3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Rhizobium etli 8C-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium etli 8C-3 plasmid pRsp8C3a, complete sequence.

Gene Summary

Adenine Count

88856 bp

Thymine Count

89261 bp

Guanine Count

127552 bp

Cytosine Count

124962 bp

Genome Length

430631 bp

Protein-coding Genes

390 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
muconolactone delta-isomeraseAM571_RS34150Not AvailableNegative1957553 - 195784311143.3
muconate/chloromuconate family cycloisomeraseAM571_RS34155Not AvailableNegative1957846 - 195900341332.6
lysr family transcriptional regulatorAM571_RS34160Not AvailablePositive1959102 - 196004936136.7
ester cyclaseAM571_RS34165Not AvailableNegative1960253 - 196063914772.8
hypothetical proteinAM571_RS34170Not AvailablePositive1961310 - 196169014065.0
caib/baif coa transferase family proteinAM571_RS34175Not AvailableNegative1962262 - 196340740931.9
helix-turn-helix transcriptional regulatorAM571_RS34180Not AvailableNegative1963446 - 19636648056.42
3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing proteinAM571_RS34185Not AvailableNegative1963594 - 196391111086.3
acyl-coa dehydrogenaseAM571_RS34190Not AvailableNegative1963971 - 196515543395.3
lysr family transcriptional regulatorAM571_RS34195Not AvailablePositive1965263 - 196619834180.3

Displaying genes 2231 – 2240 of 6604 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.