Bacteroides cellulosilyticus DSM 14838

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides cellulosilyticus DSM 14838 is a Gram-negative, rod-shaped bacterium that thrives in mesophilic environments, classified as a heterotroph and an obligate anaerobe. This microbe is part of the Bacteroides genus, which plays a crucial role in the human gut microbiome, as well as in various other environments like the intestines of animals and in diverse soil habitats. Being Gram-negative, Bacteroides cellulosilyticus possesses a thinner peptidoglycan layer and an outer membrane containing lipopolysaccharides, contributing to its resilience in harsh environments. The rod shape, or bacillus, facilitates motility and helps in the efficient colonization of substrates, particularly in nutrient-rich environments such as the gastrointestinal tract. Its mesophilic temperature preference, typically ranging from 20°C to 45°C, indicates its capability to thrive in moderate temperatures, making it well-suited for the human body and animal hosts. As a heterotroph, Bacteroides cellulosilyticus relies on organic compounds for growth and energy, often utilizing complex polysaccharides like cellulose. This ability to break down cellulose is particularly significant, as it aids in the digestion of fibrous plant materials in the intestines of herbivorous animals, thereby enhancing nutrient availability. Being an obligate anaerobe, it flourishes in environments devoid of oxygen, which is characteristic of the gut, where oxygen levels are extremely low. Notably, Bacteroides cellulosilyticus has garnered interest in biotechnological applications, particularly in the field of waste treatment and biofuel production due to its cellulose-degrading capabilities. Researchers are exploring its potential in converting agricultural waste into bioethanol, thus contributing to sustainable energy solutions and highlighting the importance of such microbes in ecological balance and environmental health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides cellulosilyticus
StrainDSM 14838

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides cellulosilyticus DSM 14838


Gene Summary

Adenine Count

1904447 bp

Thymine Count

1949198 bp

Guanine Count

1463844 bp

Cytosine Count

1408779 bp

Genome Length

6726268 bp

Protein-coding Genes

5719 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+22 - 130Not Available
23s ribosomal rnaNot AvailableNot Available+202 - 3082Not Available
transcriptional regulator, luxr familyBACCELL_00001Not Available-77 - 70623181.0
dihydrolipoyl dehydrogenaseBACCELL_00002Not Available+860 - 220948675.0
lipoyltransferase and lipoate-protein ligaseBACCELL_00003Not Available+2209 - 295828673.1
2-oxo acid dehydrogenase acyltransferase (catalytic domain)BACCELL_00004Not Available+3025 - 439849534.2
16s ribosomal rnaNot AvailableNot Available+3638 - 5148Not Available
dehydrogenase e1 componentBACCELL_00005Not Available+4417 - 525731171.0
hypothetical proteinBACCELL_00006Not Available+5681 - 610615949.9
hypothetical proteinBACCELL_00007Not Available+6312 - 673114909.4

Displaying genes 1 – 10 of 5773 in total

Metabolites

246 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da

Displaying 1–10 of 246 metabolites