Raphidiopsis brookii D9

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Aphanizomenonaceae

Genus

Raphidiopsis

Description

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyAphanizomenonaceae
GenusRaphidiopsis
SpeciesRaphidiopsis brookii
StrainD9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBillings freshwater reservoir; Fresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raphidiopsis brookii D9 D9_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

952534 bp

Thymine Count

957561 bp

Guanine Count

636369 bp

Cytosine Count

640045 bp

Genome Length

3186511 bp

Protein-coding Genes

3007 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
microcompartments proteinCRD_00504Not AvailablePositive1056586 - 105689410920.3
microcompartments proteinCRD_00505Not AvailablePositive1057002 - 105734312190.8
ethanolamine utilization protein eutn/carboxysome structural protein ccmlCRD_00506Not AvailablePositive1057350 - 105765210980.2
carbon dioxide concentrating mechanism protein ccmmCRD_00507Not AvailablePositive1057704 - 105933559332.2
transferase hexapeptide repeat proteinCRD_00508Not AvailablePositive1059622 - 106017619118.9
microcompartments proteinCRD_00509Not AvailablePositive1060236 - 106102128059.2
transcriptional regulator, lysr familyCRD_00510Not AvailablePositive1061066 - 106198034198.7
anthranilate phosphoribosyl transferaseCRD_00511Not AvailablePositive1061977 - 106302036296.1
conserved hypothetical proteinCRD_00512Not AvailableNegative1062950 - 106396636670.2
carbamoyl-phosphate synthase, small subunitCRD_00513Not AvailablePositive1064082 - 106523941811.9

Displaying genes 971 – 980 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.