Raphidiopsis brookii D9

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Aphanizomenonaceae

Genus

Raphidiopsis

Description

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyAphanizomenonaceae
GenusRaphidiopsis
SpeciesRaphidiopsis brookii
StrainD9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBillings freshwater reservoir; Fresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raphidiopsis brookii D9 D9_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

952534 bp

Thymine Count

957561 bp

Guanine Count

636369 bp

Cytosine Count

640045 bp

Genome Length

3186511 bp

Protein-coding Genes

3007 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diaminopimelate decarboxylaseCRD_01240Not AvailablePositive965726 - 96691643780.2
hypothetical proteinCRD_01241Not AvailablePositive966987 - 96829149304.7
putative asparagine synthase (glutamine- hydrolyzing)CRD_01242Not AvailableNegative968307 - 97003766909.2
conserved hypothetical proteinCRD_01243Not AvailablePositive970128 - 97085026740.5
secretion protein hlydCRD_01244Not AvailableNegative971135 - 97270058192.0
cyclic nucleotide-regulated abc bacteriocin/lantibiotic exportersCRD_01245Not AvailableNegative972729 - 97473574376.4
hypothetical proteinCRD_01246Not AvailableNegative974705 - 97573939157.4
ppic-type peptidyl-prolyl cis-trans isomeraseCRD_01247Not AvailableNegative975808 - 97653928323.9
hypothetical proteinCRD_01248Not AvailableNegative976916 - 97735616072.2
multi-component transcriptional regulator, winged helix familyCRD_01249Not AvailableNegative977367 - 97845841269.1

Displaying genes 891 – 900 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.