Raphidiopsis brookii D9

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Aphanizomenonaceae

Genus

Raphidiopsis

Description

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyAphanizomenonaceae
GenusRaphidiopsis
SpeciesRaphidiopsis brookii
StrainD9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBillings freshwater reservoir; Fresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raphidiopsis brookii D9 D9_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

952534 bp

Thymine Count

957561 bp

Guanine Count

636369 bp

Cytosine Count

640045 bp

Genome Length

3186511 bp

Protein-coding Genes

3007 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein of unknown function duf422CRD_01170Not AvailablePositive900125 - 90104233179.0
glycosyl transferase, family 2CRD_01171Not AvailablePositive901126 - 90230443811.7
ribonuclease hCRD_01172Not AvailableNegative902315 - 90324434816.3
pyridoxamine 5'-phosphate oxidase-related, fmn- bindingCRD_01173Not AvailableNegative903292 - 90385521046.2
1-aminocyclopropane-1-carboxylate deaminaseCRD_01174Not AvailablePositive904103 - 90491530536.8
yjgf-like proteinCRD_01175Not AvailablePositive905006 - 90539814114.2
udp-glucose 4-epimeraseCRD_01176Not AvailableNegative905408 - 90649940017.9
conserved hypothetical proteinCRD_01177Not AvailablePositive906634 - 90726322798.3
abc transporter, transmembrane region proteinCRD_01178Not AvailablePositive907436 - 90924767008.0
conserved hypothetical proteinCRD_01179Not AvailableNegative909313 - 9095529177.02

Displaying genes 821 – 830 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.