Raphidiopsis brookii D9

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Aphanizomenonaceae

Genus

Raphidiopsis

Description

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyAphanizomenonaceae
GenusRaphidiopsis
SpeciesRaphidiopsis brookii
StrainD9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBillings freshwater reservoir; Fresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raphidiopsis brookii D9 D9_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

952534 bp

Thymine Count

957561 bp

Guanine Count

636369 bp

Cytosine Count

640045 bp

Genome Length

3186511 bp

Protein-coding Genes

3007 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conserved hypothetical proteinCRD_00340Not AvailableNegative463170 - 46445045843.9
hypothetical proteinCRD_00341Not AvailableNegative464467 - 4646917914.63
hypothetical proteinCRD_00342Not AvailableNegative464832 - 4649574603.44
glutamate-1-semialdehyde-2,1-aminomutaseCRD_00343Not AvailableNegative464971 - 46613140823.5
phosphoribosyl-amp cyclohydrolaseCRD_00344Not AvailablePositive466266 - 46692524814.4
nad-dependent epimerase/dehydrataseCRD_00345Not AvailablePositive466941 - 46789435777.5
uroporphyrinogen decarboxylase hemeCRD_00346Not AvailablePositive468065 - 46904236187.8
glycosyl transferase, family 2CRD_00347Not AvailableNegative469111 - 46977325626.6
glycosyl transferase, group 1CRD_00348Not AvailablePositive469971 - 47115543596.1
peptidase u61, ld-carboxypeptidase aCRD_00349Not AvailableNegative471204 - 47212433415.3

Displaying genes 421 – 430 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.