Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| def2 (formylmethionine deformylase) | CRD_00026 | Not Available | Negative | 29007 - 29543 | 20166.3 |
| peptidase s1 and s6, chymotrypsin/hap | CRD_00027 | Not Available | Negative | 29620 - 30867 | 44321.4 |
| dna polymerase iii, beta chain | CRD_00028 | Not Available | Positive | 30938 - 32092 | 42387.9 |
| alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen | CRD_00029 | Not Available | Positive | 32261 - 32857 | 22062.2 |
| conserved hypothetical protein | CRD_00030 | Not Available | Negative | 32927 - 33604 | 22507.2 |
| conserved hypothetical protein | CRD_00031 | Not Available | Negative | 33626 - 34603 | 34026.4 |
| hypothetical protein | CRD_00032 | Not Available | Negative | 34858 - 37242 | 85368.8 |
| tpr repeat protein | CRD_00034 | Not Available | Negative | 37779 - 38561 | 29213.6 |
| peptidase s1 and s6, chymotrypsin/hap | CRD_00035 | Not Available | Negative | 38651 - 39448 | 28907.3 |
| hypothetical protein | CRD_00036 | Not Available | Negative | 39570 - 40484 | 31747.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.