Raphidiopsis brookii D9

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Aphanizomenonaceae

Genus

Raphidiopsis

Description

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyAphanizomenonaceae
GenusRaphidiopsis
SpeciesRaphidiopsis brookii
StrainD9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBillings freshwater reservoir; Fresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raphidiopsis brookii D9 D9_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

952534 bp

Thymine Count

957561 bp

Guanine Count

636369 bp

Cytosine Count

640045 bp

Genome Length

3186511 bp

Protein-coding Genes

3007 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conserved hypothetical proteinCRD_03035Not AvailablePositive3161659 - 316192810696.2
conserved hypothetical proteinCRD_03036Not AvailablePositive3162026 - 316238512892.2
conserved hypothetical proteinCRD_03037Not AvailablePositive3162400 - 316280714858.9
conserved hypothetical proteinCRD_03038Not AvailablePositive3162983 - 316379229982.5
papain family cysteine proteaseCRD_03039Not AvailableNegative3163905 - 316525750913.9
had-superfamily hydrolase, subfamily ia, variant 1CRD_03040Not AvailableNegative3165371 - 316600624118.4
4fe-4s cluster binding proteinCRD_03041Not AvailableNegative3165981 - 316695236721.0
hypothetical proteinCRD_03042Not AvailablePositive3167032 - 316776028218.6
putative anti-sigma regulatory factor (ser/thr protein kinase)CRD_03043Not AvailableNegative3167900 - 316832516270.5
response regulator receiver (chey) and gaf modulated serine phosphataseCRD_03044Not AvailableNegative3168329 - 317001463742.0

Displaying genes 3031 – 3040 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.