Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | CRD_03005 | Not Available | Positive | 3137566 - 3138687 | 42525.1 |
| glucose-1-phosphate thymidylyltransferase, short form | CRD_03006 | Not Available | Positive | 3138690 - 3139571 | 33025.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase related protein | CRD_03007 | Not Available | Positive | 3139630 - 3140175 | 20604.3 |
| 3-beta hydroxysteroid dehydrogenase/isomerase | CRD_03008 | Not Available | Positive | 3140172 - 3141083 | 33639.4 |
| dna repair protein rada | CRD_03009 | Not Available | Negative | 3141109 - 3142677 | 56534.5 |
| two component transcriptional regulator, winged helix family | CRD_03010 | Not Available | Positive | 3142857 - 3143585 | 27112.6 |
| conserved hypothetical protein | CRD_03011 | Not Available | Positive | 3143585 - 3144130 | 19815.6 |
| photosystem i psag/psak protein | CRD_03012 | Not Available | Positive | 3144426 - 3144689 | 8774.87 |
| phycobilisome protein | CRD_03013 | Not Available | Negative | 3144808 - 3145293 | 17940.6 |
| 23s rrna methyltransferase/ruma | CRD_03014 | Not Available | Positive | 3145408 - 3146769 | 50740.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.