Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| primosomal protein n | CRD_00288 | Not Available | Positive | 318534 - 321188 | 99423.9 |
| k+ transporting atpase, a subunit | CRD_00289 | Not Available | Positive | 321314 - 322996 | 60868.5 |
| potassium-translocating p-type atpase, b subunit | CRD_00290 | Not Available | Positive | 323026 - 325131 | 75013.5 |
| k+ transporting atpase, kdpc subunit | CRD_00291 | Not Available | Positive | 325134 - 325742 | 22510.2 |
| protein of unknown function upf0075 | CRD_00292 | Not Available | Positive | 325739 - 326902 | 42049.6 |
| phycobilisome degradation protein | CRD_00293 | Not Available | Negative | 327045 - 327239 | 7550.07 |
| prps (protein serine/threonine phosphatases) | CRD_00294 | Not Available | Negative | 327572 - 328195 | 22790.9 |
| abc-1 | CRD_00295 | Not Available | Negative | 328334 - 330127 | 68538.5 |
| conserved hypothetical protein | CRD_00296 | Not Available | Negative | 330194 - 330514 | 11696.8 |
| conserved hypothetical protein | CRD_00297 | Not Available | Negative | 330612 - 334079 | 129779.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.