Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7, 8-dihydro-6-hydroxymethylpterin- pyrophosphokinase, hppk | CRD_00019 | Not Available | Negative | 21958 - 22479 | 19069.1 |
| conserved hypothetical protein | CRD_00020 | Not Available | Negative | 22525 - 22725 | 7218.74 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 25108 - 25240 | Not Available |
| penicillin-binding protein 1a | CRD_00021 | Not Available | Negative | 22860 - 25229 | 88508.2 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 25292 - 28112 | Not Available |
| conserved hypothetical protein | CRD_00022 | Not Available | Negative | 25489 - 25911 | 16403.7 |
| fmu, rrna sam-dependent methyltransferase | CRD_00023 | Not Available | Negative | 25975 - 27372 | 53130.4 |
| conserved hypothetical protein | CRD_00024 | Not Available | Negative | 27414 - 28334 | 33314.1 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 28485 - 29971 | Not Available |
| conserved hypothetical protein | CRD_00025 | Not Available | Negative | 28340 - 28927 | 21441.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.