Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-transporter, devb family protein | CRD_02934 | Not Available | Positive | 3057968 - 3059263 | 47601.2 |
| abc transporter permease protein, devc protein | CRD_02935 | Not Available | Positive | 3059260 - 3060441 | 43900.9 |
| abc transporter-like protein | CRD_02936 | Not Available | Positive | 3060466 - 3061182 | 26190.8 |
| o-methyltransferase, family 3 | CRD_02937 | Not Available | Negative | 3061235 - 3061897 | 24605.7 |
| phosphoribulokinase/uridine kinase | CRD_02938 | Not Available | Positive | 3062086 - 3063024 | 35290.0 |
| hydrogenase accessory protein hypb | CRD_02939 | Not Available | Negative | 3062984 - 3063874 | 32831.2 |
| hydrogenase expression/synthesis, hypa | CRD_02940 | Not Available | Negative | 3063865 - 3064206 | 12342.2 |
| hydrogenase expression/formation protein hype | CRD_02941 | Not Available | Negative | 3064260 - 3065363 | 39666.1 |
| hydrogenase formation hypd protein | CRD_02942 | Not Available | Negative | 3065371 - 3066498 | 41589.5 |
| hydrogenase expression/formation protein (hupf/hypc) | CRD_02943 | Not Available | Negative | 3066526 - 3066768 | 8712.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.