Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function upf0102 | CRD_00278 | Not Available | Negative | 307411 - 307914 | 18840.6 |
| pentapeptide repeat protein | CRD_00279 | Not Available | Positive | 307930 - 308445 | 18611.4 |
| possible sensor with hamp domain protein | CRD_00280 | Not Available | Positive | 308667 - 309635 | 36063.5 |
| mscs mechanosensitive ion channel | CRD_00281 | Not Available | Positive | 309678 - 311303 | 60607.6 |
| cyanophycin synthetase-like protein | CRD_00282 | Not Available | Negative | 311390 - 312376 | 36999.9 |
| conserved hypothetical protein | CRD_00283 | Not Available | Negative | 312535 - 312762 | 8339.08 |
| conserved hypothetical protein | CRD_00284 | Not Available | Positive | 313622 - 313777 | 5793.07 |
| methionyl-trna formyltransferase | CRD_00285 | Not Available | Negative | 313767 - 314831 | 39111.9 |
| conserved hypothetical protein | CRD_00286 | Not Available | Positive | 314893 - 316134 | 45572.9 |
| sigf (sigma 28 (flagella/sporulation)) | CRD_00287 | Not Available | Negative | 316414 - 317604 | 46030.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.