Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismate synthase (probable menf) | CRD_02734 | Not Available | Negative | 2881544 - 2882959 | 52623.4 |
| 1,4-dihydroxy-2-naphthoate phytyltransferase | CRD_02735 | Not Available | Positive | 2883160 - 2884053 | 32807.7 |
| o-succinylbenzoic acid synthase | CRD_02736 | Not Available | Positive | 2884058 - 2885083 | 38942.8 |
| amp-dependent synthetase and ligase | CRD_02737 | Not Available | Positive | 2885065 - 2886543 | 55926.1 |
| thioesterase superfamily | CRD_02738 | Not Available | Negative | 2886547 - 2886996 | 17164.7 |
| hypothetical protein | CRD_02739 | Not Available | Negative | 2887060 - 2887473 | 16086.1 |
| conserved hypothetical protein | CRD_02740 | Not Available | Negative | 2887454 - 2888242 | 29875.4 |
| aminoglycoside phosphotransferase | CRD_02741 | Not Available | Negative | 2888377 - 2889624 | 47908.6 |
| protein of unknown function | CRD_02742 | Not Available | Positive | 2889916 - 2891274 | 52469.2 |
| conserved hypothetical protein | CRD_02743 | Not Available | Positive | 2891255 - 2892265 | 38970.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.