Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| grpe protein | CRD_02513 | Not Available | Negative | 2646192 - 2646764 | 21702.1 |
| type ii secretion system protein e | CRD_02514 | Not Available | Positive | 2647105 - 2648919 | 67905.5 |
| hypothetical protein | CRD_02515 | Not Available | Positive | 2648897 - 2649109 | 8119.99 |
| pilus retraction protein pilt | CRD_02516 | Not Available | Positive | 2649127 - 2650203 | 39893.9 |
| type ii secretion system protein | CRD_02517 | Not Available | Positive | 2650232 - 2651491 | 46914.6 |
| conserved hypothetical protein | CRD_02518 | Not Available | Negative | 2651521 - 2652114 | 21419.8 |
| hypothetical protein | CRD_02519 | Not Available | Negative | 2652129 - 2652566 | 15816.4 |
| possible transcriptional regulator, crp/fnr family | CRD_02520 | Not Available | Positive | 2653103 - 2654266 | 44499.2 |
| tonb-dependent receptor | CRD_02521 | Not Available | Positive | 2654360 - 2656402 | 74632.3 |
| trna pseudouridine synthase b | CRD_02522 | Not Available | Negative | 2656468 - 2657394 | 34537.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.