Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazole carboxylase, atpase subunit | CRD_01855 | Not Available | Negative | 2431128 - 2432285 | 42745.7 |
| pentapeptide repeat protein | CRD_01856 | Not Available | Negative | 2432282 - 2432770 | 17461.9 |
| delta 1-pyrroline-5-carboxylate reductase | CRD_01857 | Not Available | Negative | 2432786 - 2433601 | 28454.8 |
| protein of unknown function duf552 | CRD_01858 | Not Available | Negative | 2433632 - 2434213 | 21809.5 |
| protein of unknown function upf0001 | CRD_01859 | Not Available | Negative | 2434579 - 2435253 | 25131.6 |
| conserved hypothetical protein | CRD_01860 | Not Available | Negative | 2435250 - 2435528 | 10962.2 |
| conserved hypothetical protein | CRD_01861 | Not Available | Positive | 2435739 - 2435972 | 8902.23 |
| rhodanese-like protein | CRD_01862 | Not Available | Positive | 2436002 - 2436748 | 28306.9 |
| protein of unknown function upf0016 | CRD_01863 | Not Available | Positive | 2436973 - 2437599 | 22333.8 |
| tpr repeat protein | CRD_01864 | Not Available | Negative | 2437596 - 2438399 | 29886.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.