Raphidiopsis brookii D9

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Aphanizomenonaceae

Genus

Raphidiopsis

Description

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyAphanizomenonaceae
GenusRaphidiopsis
SpeciesRaphidiopsis brookii
StrainD9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBillings freshwater reservoir; Fresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raphidiopsis brookii D9 D9_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

952534 bp

Thymine Count

957561 bp

Guanine Count

636369 bp

Cytosine Count

640045 bp

Genome Length

3186511 bp

Protein-coding Genes

3007 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conserved hypothetical proteinCRD_01725Not AvailablePositive2311286 - 23114656311.66
conserved hypothetical proteinCRD_01726Not AvailablePositive2311724 - 231386281537.5
abc-1CRD_01727Not AvailablePositive2314013 - 231589971795.1
protein of unknown function duf344CRD_01728Not AvailableNegative2315938 - 231684335405.3
alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergenCRD_01729Not AvailableNegative2316833 - 231743522431.1
threonine dehydratase iCRD_01730Not AvailablePositive2317636 - 231914756209.6
udp-n-acetylmuramoylalanine-d-glutamate ligaseCRD_01731Not AvailableNegative2319172 - 232057250917.0
glycyl and arginyl trna synthetaseCRD_01732Not AvailableNegative2320652 - 232280280329.6
hypothetical proteinCRD_01733Not AvailableNegative2322838 - 232365931898.9
hypothetical proteinCRD_01734Not AvailableNegative2323977 - 232471128548.7

Displaying genes 2141 – 2150 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.