Raphidiopsis brookii D9

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Aphanizomenonaceae

Genus

Raphidiopsis

Description

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyAphanizomenonaceae
GenusRaphidiopsis
SpeciesRaphidiopsis brookii
StrainD9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBillings freshwater reservoir; Fresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raphidiopsis brookii D9 D9_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

952534 bp

Thymine Count

957561 bp

Guanine Count

636369 bp

Cytosine Count

640045 bp

Genome Length

3186511 bp

Protein-coding Genes

3007 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bacteriocin-processing peptidaseCRD_01705Not AvailableNegative2283425 - 2286133101294.0
conserved hypothetical proteinCRD_01706Not AvailableNegative2286174 - 228677323157.6
hypothetical proteinCRD_01707Not AvailableNegative2287187 - 22874178977.0
conserved hypothetical proteinCRD_01708Not AvailablePositive2288064 - 229010975099.5
c-5 cytosine-specific dna methylaseCRD_01709Not AvailableNegative2290128 - 22902956185.49
small gtp-binding protein domain proteinCRD_01710Not AvailableNegative2290325 - 229183955370.0
isopentenyl-diphosphate delta-isomerase, fmn- dependentCRD_01711Not AvailablePositive2291944 - 229299038083.3
peptidase s49, protease ivCRD_01712Not AvailablePositive2293085 - 229490866795.8
nitrilase/cyanide hydratase and apolipoprotein n-acyltransferaseCRD_01713Not AvailableNegative2294944 - 229618845515.6
nh(3)-dependent nad(+) synthetaseCRD_01714Not AvailableNegative2296317 - 229662511115.9

Displaying genes 2121 – 2130 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.