Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoate synthase | CRD_00655 | Not Available | Positive | 2164965 - 2165834 | 32727.3 |
| nad-dependent glycerol-3-phosphate dehydrogenase-like protein | CRD_00656 | Not Available | Positive | 2166020 - 2166877 | 30744.2 |
| sigc (sigma 28 (flagella/sporulation)) | CRD_00657 | Not Available | Positive | 2167382 - 2168671 | 48909.8 |
| ferric uptake regulator (fur) family | CRD_00658 | Not Available | Negative | 2168737 - 2169192 | 17353.0 |
| dna modification methyltransferase-related protein | CRD_00659 | Not Available | Negative | 2169313 - 2172174 | 109438.0 |
| cobaltochelatase, cobn subunit | CRD_00660 | Not Available | Negative | 2172324 - 2176127 | 142144.0 |
| multi-sensor signal transduction histidine kinase | CRD_00661 | Not Available | Positive | 2176296 - 2178227 | 72327.9 |
| hypothetical protein | CRD_00662 | Not Available | Positive | 2178274 - 2178885 | 21840.7 |
| conserved hypothetical protein | CRD_00663 | Not Available | Positive | 2179247 - 2179576 | 12641.9 |
| hypothetical protein | CRD_00664 | Not Available | Positive | 2179519 - 2179854 | 11869.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.