Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 2-epimerase | CRD_02395 | Not Available | Negative | 2145292 - 2146413 | 40849.6 |
| conserved hypothetical protein | CRD_02396 | Not Available | Negative | 2146694 - 2147065 | 13268.0 |
| hypothetical protein | CRD_02397 | Not Available | Negative | 2147142 - 2147315 | 6908.57 |
| kaib | CRD_02398 | Not Available | Positive | 2147510 - 2148286 | 29723.9 |
| zn-dependent hydrolase (beta- lactamase fold protein) | CRD_02399 | Not Available | Positive | 2148374 - 2149150 | 28738.8 |
| tpr repeat protein | CRD_02400 | Not Available | Positive | 2149177 - 2150823 | 62608.9 |
| photosystem ii reaction centre protein psba/d1 | CRD_02401 | Not Available | Negative | 2151024 - 2152106 | 39519.6 |
| transposase, is4 | CRD_02402 | Not Available | Positive | 2152594 - 2152770 | 7006.8 |
| regulatory protein cii | CRD_02403 | Not Available | Positive | 2152907 - 2153926 | 37914.2 |
| hypothetical protein | CRD_02404 | Not Available | Positive | 2153957 - 2154718 | 28611.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.