Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase, alpha subunit | CRD_02385 | Not Available | Positive | 2136934 - 2137914 | 35697.1 |
| short-chain dehydrogenase/reductase sdr | CRD_02386 | Not Available | Positive | 2138286 - 2139011 | 25511.9 |
| gtp cyclohydrolase i | CRD_02387 | Not Available | Positive | 2139051 - 2139758 | 26432.1 |
| Trna-arg | Not Available | Not Available | Positive | 2139803 - 2139876 | Not Available |
| conserved hypothetical protein | CRD_02389 | Not Available | Negative | 2139931 - 2141028 | 41393.9 |
| Trna-ala | Not Available | Not Available | Positive | 2141245 - 2141317 | Not Available |
| had-superfamily hydrolase subfamily ia, variant 3 | CRD_02391 | Not Available | Negative | 2141333 - 2142190 | 32661.3 |
| squalene/phytoene synthase | CRD_02392 | Not Available | Positive | 2142235 - 2142882 | 24121.8 |
| serine/threonine protein kinase | CRD_02393 | Not Available | Positive | 2143084 - 2145090 | 75146.3 |
| hypothetical protein | CRD_02394 | Not Available | Positive | 2145146 - 2145289 | 5471.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.