Raphidiopsis brookii D9

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Aphanizomenonaceae

Genus

Raphidiopsis

Description

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyAphanizomenonaceae
GenusRaphidiopsis
SpeciesRaphidiopsis brookii
StrainD9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBillings freshwater reservoir; Fresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raphidiopsis brookii D9 D9_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

952534 bp

Thymine Count

957561 bp

Guanine Count

636369 bp

Cytosine Count

640045 bp

Genome Length

3186511 bp

Protein-coding Genes

3007 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCRD_02345Not AvailableNegative2095923 - 20960153536.28
aminotransferase, class i and iiCRD_02346Not AvailableNegative2096022 - 209735049061.0
mechanosensitive ion channelCRD_02347Not AvailableNegative2097461 - 209897557844.7
nitrate transport atp-binding subunits c and dCRD_02348Not AvailableNegative2099375 - 210012728168.3
integral membrane components of other binding- protein-dependent transport systemCRD_02349Not AvailableNegative2100167 - 210095828944.7
taua, abc-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentCRD_02350Not AvailableNegative2101016 - 210201136161.2
hydrogenase accessory protein hypbCRD_02351Not AvailableNegative2102012 - 210271325751.8
hydrogenase nickel insertion protein hypaCRD_02352Not AvailableNegative2102722 - 210307813726.9
putative agmatine ureohydrolaseCRD_02353Not AvailableNegative2103082 - 210426043691.1
rna methyltransferase trmh, group 1CRD_02354Not AvailablePositive2104652 - 210538927373.3

Displaying genes 1951 – 1960 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.