Raphidiopsis brookii D9

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Aphanizomenonaceae

Genus

Raphidiopsis

Description

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyAphanizomenonaceae
GenusRaphidiopsis
SpeciesRaphidiopsis brookii
StrainD9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBillings freshwater reservoir; Fresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raphidiopsis brookii D9 D9_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

952534 bp

Thymine Count

957561 bp

Guanine Count

636369 bp

Cytosine Count

640045 bp

Genome Length

3186511 bp

Protein-coding Genes

3007 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphohistidine phosphatase, sixaCRD_02335Not AvailablePositive2087797 - 208830319462.7
2-methylcitrate synthase/citrate synthase iiCRD_02336Not AvailablePositive2088419 - 208955542523.4
respiratory-chain nadh dehydrogenase, subunit 1CRD_02337Not AvailablePositive2089797 - 209091540388.8
nadh-plastoquinone oxidoreductase, subunit iCRD_02338Not AvailablePositive2090950 - 209153422143.8
nadh-ubiquinone/plastoquinone oxidoreductase, chain 6CRD_02339Not AvailablePositive2091535 - 209217922651.3
nadh-ubiquinone oxidoreductase, chain 4lCRD_02340Not AvailablePositive2092204 - 209250911183.0
atp-nad/acox kinaseCRD_02341Not AvailablePositive2092516 - 209343633867.0
dienelactone hydrolaseCRD_02342Not AvailablePositive2093670 - 209440726923.0
rna binding s1CRD_02343Not AvailablePositive2094478 - 209537733182.6
16s rrna processing protein rimmCRD_02344Not AvailableNegative2095379 - 209587318393.3

Displaying genes 1941 – 1950 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.