Raphidiopsis brookii D9

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Aphanizomenonaceae

Genus

Raphidiopsis

Description

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyAphanizomenonaceae
GenusRaphidiopsis
SpeciesRaphidiopsis brookii
StrainD9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBillings freshwater reservoir; Fresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raphidiopsis brookii D9 D9_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

952534 bp

Thymine Count

957561 bp

Guanine Count

636369 bp

Cytosine Count

640045 bp

Genome Length

3186511 bp

Protein-coding Genes

3007 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uspaCRD_02295Not AvailablePositive2042513 - 204292014615.6
conserved hypothetical proteinCRD_02296Not AvailablePositive2043035 - 204335812995.8
penicillin-binding protein 1aCRD_02297Not AvailableNegative2043384 - 204530669642.7
tyrosyl-trna synthetase, class ibCRD_02298Not AvailablePositive2045548 - 204674444498.4
orotidine 5'-phosphate decarboxylaseCRD_02299Not AvailablePositive2046766 - 204748825942.8
conserved hypothetical proteinCRD_02300Not AvailablePositive2047510 - 204809422382.8
hypothetical proteinCRD_02301Not AvailablePositive2048197 - 204852313001.6
nadph:quinone reductase and related zn-dependent oxidoreductasesCRD_02302Not AvailableNegative2048530 - 204947733342.1
pentapeptide repeat proteinCRD_02303Not AvailableNegative2049522 - 205089850503.4
light-dependent protochlorophyllide reductaseCRD_02304Not AvailableNegative2050982 - 205194135244.4

Displaying genes 1901 – 1910 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.