Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine 2,3-aminomutase yodo family protein | CRD_02275 | Not Available | Negative | 2019264 - 2020391 | 42347.4 |
| possible abortive infection phage resistance protein | CRD_02276 | Not Available | Negative | 2020678 - 2022342 | 63314.7 |
| conserved hypothetical protein | CRD_02277 | Not Available | Negative | 2022490 - 2022963 | 18334.6 |
| riboflavin-specific deaminase | CRD_02278 | Not Available | Negative | 2023248 - 2023361 | 3964.02 |
| heat shock protein hsp70 | CRD_02279 | Not Available | Positive | 2023905 - 2025803 | 67742.0 |
| bifunctional nmn adenylyltransferase/nudix hydrolase | CRD_02280 | Not Available | Positive | 2026011 - 2027036 | 39831.8 |
| pre-b cell enhancing factor | CRD_02281 | Not Available | Positive | 2027045 - 2028451 | 52256.5 |
| conserved hypothetical protein | CRD_02282 | Not Available | Negative | 2028498 - 2029274 | 28304.2 |
| ribonuclease iii | CRD_02283 | Not Available | Negative | 2029368 - 2030090 | 26961.3 |
| conserved hypothetical protein | CRD_02284 | Not Available | Negative | 2030518 - 2031234 | 27383.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.