Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-like protein | CRD_02175 | Not Available | Positive | 1902032 - 1903105 | 38131.2 |
| d-alanine--d-alanine ligase | CRD_02176 | Not Available | Positive | 1903214 - 1904287 | 38965.5 |
| transketolase | CRD_02177 | Not Available | Positive | 1904406 - 1905389 | 36238.0 |
| secd export membrane protein | CRD_02178 | Not Available | Positive | 1905510 - 1906916 | 50454.7 |
| secf protein | CRD_02179 | Not Available | Positive | 1906913 - 1907869 | 35483.3 |
| phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 1 | CRD_02180 | Not Available | Negative | 1907985 - 1909034 | 38605.5 |
| hypothetical protein | CRD_02181 | Not Available | Negative | 1909009 - 1909149 | 5052.09 |
| glycosyl transferase, family 2 | CRD_02182 | Not Available | Positive | 1909179 - 1910582 | 52615.9 |
| glucokinase | CRD_02183 | Not Available | Negative | 1910651 - 1911772 | 40324.2 |
| dehydrogenase, e1 component | CRD_02184 | Not Available | Positive | 1911819 - 1912856 | 38393.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.