Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase related protein | CRD_02105 | Not Available | Negative | 1830332 - 1830877 | 20445.5 |
| conserved hypothetical protein | CRD_02106 | Not Available | Negative | 1830960 - 1831814 | 33006.5 |
| glycosyl transferase, family 2 | CRD_02107 | Not Available | Negative | 1831848 - 1832861 | 38147.1 |
| 3-beta hydroxysteroid dehydrogenase/isomerase | CRD_02108 | Not Available | Negative | 1832999 - 1834021 | 38253.0 |
| fad dependent oxidoreductase | CRD_02109 | Not Available | Negative | 1834114 - 1835322 | 44466.6 |
| nucleotidyl transferase | CRD_02110 | Not Available | Negative | 1835351 - 1836127 | 29395.2 |
| tpr repeat protein | CRD_02111 | Not Available | Negative | 1836399 - 1838591 | 83401.5 |
| conserved hypothetical protein | CRD_02112 | Not Available | Negative | 1838634 - 1839413 | 28241.1 |
| von willebrand factor, type a | CRD_02113 | Not Available | Negative | 1839459 - 1840157 | 25987.2 |
| abc transporter-like protein | CRD_02114 | Not Available | Positive | 1840534 - 1841817 | 48318.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.