Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-ubiquinone/plastoquinone oxidoreductase, chain 3 | CRD_02055 | Not Available | Negative | 1784933 - 1785295 | 13719.0 |
| rubredoxin-type fe(cys)4 protein | CRD_02056 | Not Available | Positive | 1785494 - 1785838 | 12351.7 |
| glycosyl hydrolase, bnr repeat protein | CRD_02057 | Not Available | Positive | 1785939 - 1786931 | 36125.2 |
| c-5 cytosine-specific dna methylase | CRD_02058 | Not Available | Positive | 1787003 - 1788310 | 49053.0 |
| conserved hypothetical protein | CRD_02059 | Not Available | Positive | 1788331 - 1788858 | 19529.1 |
| protein of unknown function duf427 | CRD_02060 | Not Available | Negative | 1788872 - 1789153 | 10622.3 |
| hypothetical protein | CRD_02061 | Not Available | Negative | 1789536 - 1790264 | 27794.2 |
| hypothetical protein | CRD_02062 | Not Available | Negative | 1790433 - 1791095 | 25141.9 |
| hypothetical protein | CRD_02063 | Not Available | Negative | 1791140 - 1791415 | 10684.0 |
| hypothetical protein | CRD_02064 | Not Available | Positive | 1791574 - 1791804 | 8607.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.