Raphidiopsis brookii D9

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Aphanizomenonaceae

Genus

Raphidiopsis

Description

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyAphanizomenonaceae
GenusRaphidiopsis
SpeciesRaphidiopsis brookii
StrainD9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBillings freshwater reservoir; Fresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raphidiopsis brookii D9 D9_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

952534 bp

Thymine Count

957561 bp

Guanine Count

636369 bp

Cytosine Count

640045 bp

Genome Length

3186511 bp

Protein-coding Genes

3007 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ferredoxin thioredoxin reductase, beta chainCRD_02045Not AvailablePositive1770569 - 177094314031.6
protein of unknown function duf309CRD_02046Not AvailablePositive1770950 - 177135414954.9
conserved hypothetical proteinCRD_02047Not AvailablePositive1771485 - 177193116433.6
abc transporter-like proteinCRD_02048Not AvailablePositive1771965 - 177272628299.7
permease yjgp/yjgqCRD_02049Not AvailablePositive1772845 - 177402044019.3
tpr repeat proteinCRD_02050Not AvailableNegative1774040 - 1777879144589.0
hypothetical proteinCRD_02051Not AvailableNegative1777876 - 1782045160302.0
tryptophan synthase, beta chainCRD_02052Not AvailableNegative1782341 - 178360345553.6
nadh dehydrogenase (ubiquinone), 30 kda subunitCRD_02053Not AvailableNegative1783700 - 178421519517.0
nadh dehydrogenase (ubiquinone), 20 kda subunitCRD_02054Not AvailableNegative1784208 - 178494227345.4

Displaying genes 1651 – 1660 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.