Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m23b | CRD_02025 | Not Available | Positive | 1749300 - 1750781 | 53285.5 |
| lumazine-binding protein | CRD_02026 | Not Available | Negative | 1750806 - 1751480 | 24490.4 |
| protein of unknown function duf151 | CRD_02027 | Not Available | Positive | 1751881 - 1752378 | 18564.4 |
| aldo/keto reductase | CRD_02028 | Not Available | Positive | 1752455 - 1753585 | 42841.4 |
| pyridoxamine 5'-phosphate oxidase | CRD_02029 | Not Available | Negative | 1753913 - 1754557 | 24991.5 |
| protein of unknown function upf0118 | CRD_02030 | Not Available | Positive | 1754644 - 1755447 | 30117.0 |
| hypothetical protein | CRD_02031 | Not Available | Positive | 1755413 - 1755628 | 7517.59 |
| prokaryotic chromosome segregation and condensation protein scpa | CRD_02032 | Not Available | Positive | 1755658 - 1756464 | 30670.6 |
| hypothetical protein | CRD_02033 | Not Available | Positive | 1756568 - 1756930 | 13750.3 |
| nucleotidyl transferase | CRD_02034 | Not Available | Positive | 1756906 - 1757736 | 30329.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.