Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m15b and m15c, d,d-carboxypeptidase vany/endolysins | CRD_01547 | Not Available | Negative | 1480353 - 1481135 | 28017.0 |
| sugar-non-specific nuclease inhibitor nuia-like protein | CRD_01548 | Not Available | Negative | 1481222 - 1481641 | 16095.2 |
| Trna-cys | Not Available | Not Available | Positive | 1481652 - 1481723 | Not Available |
| transcriptional repressor, copy family | CRD_01550 | Not Available | Positive | 1481816 - 1482235 | 15612.6 |
| conserved hypothetical protein | CRD_01551 | Not Available | Positive | 1482402 - 1483136 | 27664.6 |
| ferredoxin thioredoxin reductase, alpha chain | CRD_01552 | Not Available | Negative | 1483169 - 1483393 | 8349.05 |
| protein serine/threonine phosphatase | CRD_01553 | Not Available | Negative | 1483485 - 1485329 | 69019.6 |
| protein of unknown function duf107 | CRD_01554 | Not Available | Positive | 1485650 - 1486084 | 16148.3 |
| band 7 protein | CRD_01555 | Not Available | Positive | 1486138 - 1487112 | 35993.8 |
| ferric uptake regulator (fur) family | CRD_01556 | Not Available | Negative | 1487145 - 1487528 | 14609.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.