Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromate transporter | CRD_01537 | Not Available | Negative | 1467011 - 1468189 | 42504.8 |
| glycerophosphoryl diester phosphodiesterase | CRD_01538 | Not Available | Negative | 1468214 - 1469242 | 38477.9 |
| non-ribosomal peptide synthase | CRD_01539 | Not Available | Positive | 1469438 - 1472137 | 101358.0 |
| nad-dependent dna ligase | CRD_01540 | Not Available | Positive | 1472221 - 1474299 | 77736.6 |
| protein of unknown function duf820 | CRD_01541 | Not Available | Negative | 1474296 - 1474910 | 23174.6 |
| protein of unknown function duf6, transmembrane | CRD_01542 | Not Available | Positive | 1475069 - 1475998 | 33662.4 |
| hypothetical protein | CRD_01543 | Not Available | Positive | 1475988 - 1476194 | 6987.24 |
| hypothetical protein | CRD_01544 | Not Available | Positive | 1477827 - 1477982 | 5911.03 |
| hypothetical protein | CRD_01545 | Not Available | Positive | 1478242 - 1478520 | 10679.4 |
| pilq(type ii and iii secretion system protein) | CRD_01546 | Not Available | Positive | 1478756 - 1480324 | 57353.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.