Raphidiopsis brookii D9

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Aphanizomenonaceae

Genus

Raphidiopsis

Description

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyAphanizomenonaceae
GenusRaphidiopsis
SpeciesRaphidiopsis brookii
StrainD9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBillings freshwater reservoir; Fresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raphidiopsis brookii D9 D9_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

952534 bp

Thymine Count

957561 bp

Guanine Count

636369 bp

Cytosine Count

640045 bp

Genome Length

3186511 bp

Protein-coding Genes

3007 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sec-independent periplasmic protein translocaseCRD_01507Not AvailableNegative1433569 - 143435729028.3
lytic transglycosylase, catalyticCRD_01508Not AvailableNegative1434400 - 143658082392.6
hypothetical proteinCRD_01509Not AvailableNegative1436734 - 143729721182.3
ubiquinone biosynthesis hydroxylase, ubih/ubif/visc/coq6CRD_01510Not AvailableNegative1437294 - 143859848343.8
periplasmic phosphate binding proteinCRD_01511Not AvailablePositive1438848 - 143988537173.6
phosphate abc transporter, permease protein pstcCRD_01512Not AvailablePositive1440006 - 144100135419.0
phosphate transport system permease protein 2CRD_01513Not AvailablePositive1441034 - 144197534003.5
phosphate transport system permease protein 1CRD_01514Not AvailablePositive1442079 - 144285828666.7
transcriptional coactivator/pterin dehydrataseCRD_01515Not AvailableNegative1442834 - 144317512695.2
conserved hypothetical proteinCRD_01516Not AvailableNegative1443253 - 144426638159.3

Displaying genes 1331 – 1340 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.