Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-related | CRD_00612 | Not Available | Positive | 1380388 - 1380909 | 18737.5 |
| cytochrome c biogenesis protein, transmembrane region protein | CRD_00613 | Not Available | Positive | 1380984 - 1381847 | 30990.1 |
| hypothetical protein | CRD_00614 | Not Available | Negative | 1381923 - 1383548 | 62174.1 |
| protein of unknown function duf88 | CRD_01460 | Not Available | Positive | 1383755 - 1384276 | 20262.9 |
| 2-isopropylmalate synthase | CRD_01461 | Not Available | Positive | 1384553 - 1386145 | 57491.4 |
| zinc-containing alcohol dehydrogenase superfamily | CRD_01462 | Not Available | Positive | 1386221 - 1387267 | 38032.1 |
| phosphate transporter | CRD_01463 | Not Available | Positive | 1387299 - 1388546 | 43877.5 |
| protein of unknown function duf6, transmembrane | CRD_01464 | Not Available | Positive | 1388591 - 1390624 | 75198.9 |
| hypothetical protein | CRD_01465 | Not Available | Positive | 1391370 - 1391798 | 16319.7 |
| magnesium-chelatase, subunit h | CRD_01466 | Not Available | Negative | 1391841 - 1395827 | 148159.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.