Raphidiopsis brookii D9

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Aphanizomenonaceae

Genus

Raphidiopsis

Description

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyAphanizomenonaceae
GenusRaphidiopsis
SpeciesRaphidiopsis brookii
StrainD9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBillings freshwater reservoir; Fresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raphidiopsis brookii D9 D9_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

952534 bp

Thymine Count

957561 bp

Guanine Count

636369 bp

Cytosine Count

640045 bp

Genome Length

3186511 bp

Protein-coding Genes

3007 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinCRD_01421Not AvailablePositive1332919 - 133443655818.9
abc transporter atp-binding proteinCRD_01422Not AvailablePositive1334396 - 133508825317.9
glucose-6-phosphate isomerase (gpi) (phosphoglucose isomerase) (pgi) (phosphohexose isomerase) (phi)CRD_01423Not AvailableNegative1335189 - 133677558106.7
permease protein of abc transporterCRD_01424Not AvailablePositive1336984 - 133812041522.9
response regulator receiver domain protein (chey)CRD_01425Not AvailableNegative1338146 - 133988264798.0
ferric uptake regulator (fur) familyCRD_01426Not AvailableNegative1339946 - 134043118637.4
conserved hypothetical proteinCRD_01427Not AvailablePositive1340589 - 134106818767.7
glycosyl transferase, family 9CRD_01428Not AvailableNegative1341311 - 134226435003.0
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseCRD_01429Not AvailablePositive1342366 - 134304324415.8
predicted transcriptional regulatorCRD_01430Not AvailablePositive1343040 - 134358520489.7

Displaying genes 1241 – 1250 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.