Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin (2fe-2s) | CRD_01391 | Not Available | Positive | 1304974 - 1305342 | 13612.0 |
| nuclease (snase-like protein) | CRD_01392 | Not Available | Positive | 1305355 - 1305948 | 22279.9 |
| inositol monophosphatase | CRD_01393 | Not Available | Positive | 1305965 - 1306780 | 29378.8 |
| atp phosphoribosyltransferase regulatory subunit | CRD_01394 | Not Available | Positive | 1306851 - 1308062 | 45400.5 |
| 4fe-4s ferredoxin, iron-sulfur binding | CRD_01395 | Not Available | Positive | 1308094 - 1308321 | 8154.89 |
| atp-binding protein of branched-chain amino acid abc transporter | CRD_01396 | Not Available | Positive | 1308333 - 1309121 | 28540.9 |
| deoxycytidine triphosphate deaminase | CRD_01397 | Not Available | Negative | 1309102 - 1309437 | 11979.2 |
| Trna-arg | Not Available | Not Available | Positive | 1309746 - 1309821 | Not Available |
| hypothetical protein | CRD_01399 | Not Available | Positive | 1310302 - 1311300 | 37290.0 |
| sulfite reductase, ferredoxin dependent | CRD_01400 | Not Available | Positive | 1311643 - 1313568 | 72608.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.