Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase, family 2 | CRD_01381 | Not Available | Negative | 1293233 - 1294477 | 47078.9 |
| conserved hypothetical protein | CRD_01382 | Not Available | Positive | 1294625 - 1295824 | 44461.5 |
| photosystem ii 11 kd protein | CRD_01383 | Not Available | Positive | 1295861 - 1296259 | 14859.9 |
| valyl-trna synthetase (valine--trna ligase) (valrs) | CRD_01384 | Not Available | Negative | 1296263 - 1299400 | 118573.0 |
| cell wall hydrolase/autolysin | CRD_01385 | Not Available | Negative | 1299512 - 1300864 | 49475.1 |
| dna primase | CRD_01386 | Not Available | Positive | 1300999 - 1302909 | 73197.0 |
| urease accessory protein ureg | CRD_01387 | Not Available | Negative | 1302906 - 1303502 | 21527.9 |
| urease accessory protein uref | CRD_01388 | Not Available | Negative | 1303547 - 1304236 | 25476.6 |
| urease accessory protein uree | CRD_01389 | Not Available | Negative | 1304211 - 1304657 | 16816.2 |
| Trna-ser | Not Available | Not Available | Positive | 1304745 - 1304831 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.