Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Aphanizomenonaceae
Genus
Raphidiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Aphanizomenonaceae |
| Genus | Raphidiopsis |
| Species | Raphidiopsis brookii |
| Strain | D9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Billings freshwater reservoir; Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
952534 bp
Thymine Count
957561 bp
Guanine Count
636369 bp
Cytosine Count
640045 bp
Genome Length
3186511 bp
Protein-coding Genes
3007 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolyl-trna synthetase | CRD_01293 | Not Available | Negative | 1110345 - 1112159 | 67855.3 |
| Trna-ser | Not Available | Not Available | Positive | 1112188 - 1112271 | Not Available |
| probable competence protein | CRD_01295 | Not Available | Negative | 1112376 - 1114715 | 85926.5 |
| glycyl-trna synthetase, alpha subunit | CRD_01296 | Not Available | Negative | 1114712 - 1115866 | 44043.6 |
| Trna-ile | Not Available | Not Available | Positive | 1117587 - 1117663 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 1117667 - 1117739 | Not Available |
| conserved hypothetical protein | CRD_01302 | Not Available | Positive | 1121016 - 1122566 | 59343.2 |
| hypothetical protein | CRD_01303 | Not Available | Negative | 1122536 - 1124071 | 59879.7 |
| udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6- diaminopimelate-d-alanyl-d-alanyl ligase | CRD_01304 | Not Available | Negative | 1124134 - 1125447 | 46938.1 |
| histone deacetylase superfamily | CRD_01305 | Not Available | Negative | 1125905 - 1126813 | 33382.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.