Raphidiopsis brookii D9

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Aphanizomenonaceae

Genus

Raphidiopsis

Description

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyAphanizomenonaceae
GenusRaphidiopsis
SpeciesRaphidiopsis brookii
StrainD9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBillings freshwater reservoir; Fresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raphidiopsis brookii D9 D9_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

952534 bp

Thymine Count

957561 bp

Guanine Count

636369 bp

Cytosine Count

640045 bp

Genome Length

3186511 bp

Protein-coding Genes

3007 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCRD_01283Not AvailableNegative1102403 - 110287618354.1
peptidase m41, ftshCRD_01284Not AvailableNegative1102965 - 110490270396.2
hypothetical proteinCRD_01285Not AvailableNegative1104985 - 110529610273.1
hypothetical proteinCRD_01286Not AvailableNegative1105278 - 110565214201.0
protein of unknown function upf0118CRD_01287Not AvailablePositive1106030 - 110710940188.6
peptidyl-prolyl cis-trans isomerase, cyclophilin typeCRD_01288Not AvailableNegative1107129 - 110818138217.9
hypothetical proteinCRD_01289Not AvailableNegative1108219 - 11083776081.27
elongation factor pCRD_01290Not AvailablePositive1108376 - 110895721652.1
acetyl-coa biotin carboxyl carrierCRD_01291Not AvailablePositive1109050 - 110953817372.7
conserved hypothetical proteinCRD_01292Not AvailableNegative1109593 - 111020421584.5

Displaying genes 1021 – 1030 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.