Acidimicrobium ferrooxidans DSM 10331

Gram-positiveRodNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Acidimicrobiia

Order

Acidimicrobiales

Family

Acidimicrobiaceae

Genus

Acidimicrobium

Description

Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) is a moderately thermophilic, ferrous-iron-oxidizing acidophile Gram-positive bacterium isolated from hot spring runoff in Iceland. This organism is able to oxidize ferrous iron to ferric iron. The optimal growth temperature for A.ferrooxidans is 48 degrees Celsius (Adapted from PMID: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=29525). (EBI Integr8)

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassAcidimicrobiia
OrderAcidimicrobiales
FamilyAcidimicrobiaceae
GenusAcidimicrobium
SpeciesAcidimicrobium ferrooxidans
StrainDSM 10331

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Acidimicrobium ferrooxidans DSM 10331
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature45
Temperature rangeThermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceAutotroph
PathogenicityNo

Genome Summary

Acidimicrobium ferrooxidans DSM 10331, complete sequence.

Gene Summary

Adenine Count

342988 bp

Thymine Count

341378 bp

Guanine Count

736799 bp

Cytosine Count

736992 bp

Genome Length

2158157 bp

Protein-coding Genes

2018 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protease pro-enzyme activation domain-containing proteinAFER_RS00400Not AvailableNegative81088 - 8317872919.0
hiss family proteinAFER_RS00405Not AvailableNegative83357 - 8463446998.5
hypothetical proteinAFER_RS11865Not AvailablePositive84769 - 8529617355.8
adenine deaminaseAFER_RS00415Not AvailablePositive85431 - 8711659280.2
thiolase family proteinAFER_RS00420Not AvailablePositive87173 - 8834840711.8
aminodeoxychorismate/anthranilate synthase component iiAFER_RS00425Not AvailablePositive88349 - 8894221520.8
stk1 family pasta domain-containing ser/thr kinaseAFER_RS00430Not AvailableNegative89146 - 9108366531.0
stk1 family pasta domain-containing ser/thr kinaseAFER_RS00435Not AvailableNegative91136 - 9269855097.3
penicillin-binding protein 2AFER_RS00440Not AvailableNegative92695 - 9417651547.9
stp1/irep family pp2c-type ser/thr phosphataseAFER_RS10645Not AvailableNegative94169 - 9543743802.8

Displaying genes 81 – 90 of 2073 in total

Metabolites

6 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00037771D-myo-inositol 2-(L-cysteinylamino)-2-deoxy-alpha-D-glucopyranosideC15H29N2O11SChemical structure of 1D-myo-inositol 2-(L-cysteinylamino)-2-deoxy-alpha-D-glucopyranosideNot available
Average445.46Da
Monoisotopic445.1486574Da
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039658Bifidobacterium pseudocatenulatumNot availableNot availableNot available
BASm0039669Erysipelotrichaceae bacterium 21_3Not availableNot availableNot available
BASm0039828MycobacteriumNot availableNot availableNot available

Displaying 1–6 of 6 metabolites

Health Effects

No health effects information available for this bacterium.