Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | PLIM_RS00090 | P26489 | - | 19592 - 21172 | 57800.1 |
| hypothetical protein | PLIM_RS22085 | Not Available | + | 21458 - 23131 | 59772.6 |
| duf1080 domain-containing protein | PLIM_RS00100 | Not Available | + | 23639 - 24388 | 27306.4 |
| hypothetical protein | PLIM_RS00105 | Not Available | + | 24534 - 25226 | 26058.3 |
| hypothetical protein | PLIM_RS00110 | Not Available | - | 25335 - 25664 | 11479.6 |
| hypothetical protein | PLIM_RS22090 | Not Available | + | 26609 - 27772 | 42269.5 |
| cytochrome c biogenesis protein | PLIM_RS22095 | Q9S1E4 | + | 27971 - 31606 | 133418.0 |
| translation initiation factor | PLIM_RS00135 | Not Available | - | 31720 - 32082 | 13204.0 |
| histidine--trna ligase | PLIM_RS00140 | Q7UZ20 | - | 32095 - 33420 | 48234.3 |
| cytochrome-c peroxidase | PLIM_RS00150 | Not Available | + | 34331 - 35662 | 48296.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.