Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | DSM 3776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS14480 | Not Available | Positive | 3657064 - 3657297 | 8716.37 |
| hypothetical protein | PLIM_RS14485 | Not Available | Positive | 3657294 - 3657530 | 8771.3 |
| hypothetical protein | PLIM_RS23020 | Not Available | Negative | 3657693 - 3658082 | 14912.9 |
| hypothetical protein | PLIM_RS14495 | Not Available | Negative | 3658087 - 3658569 | 18122.1 |
| peptide-methionine (r)-s-oxide reductase msrb | PLIM_RS14500 | Q47EU6 | Negative | 3658622 - 3659074 | 16726.8 |
| caspase family protein | PLIM_RS14505 | Not Available | Negative | 3659212 - 3660378 | 44501.8 |
| duf1559 domain-containing protein | PLIM_RS14515 | Not Available | Negative | 3660574 - 3661548 | 34519.9 |
| rna polymerase sigma factor | PLIM_RS14520 | Q06198 | Negative | 3661961 - 3662569 | 22751.2 |
| phosphoglycerate dehydrogenase | PLIM_RS14525 | O29445 | Positive | 3662964 - 3664604 | 58540.2 |
| m48 family metalloprotease | PLIM_RS14530 | Not Available | Negative | 3664764 - 3665618 | 30843.9 |
Pathways
481 pathways
Health Effects
No health effects information available for this bacterium.
