Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | DSM 3776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoate--protein ligase family protein | PLIM_RS13420 | Not Available | Negative | 3386445 - 3387206 | 28264.8 |
| sis domain-containing protein | PLIM_RS13425 | Not Available | Negative | 3387253 - 3388275 | 36666.2 |
| diphosphate--fructose-6-phosphate 1-phosphotransferase | PLIM_RS13430 | Q2RNU4 | Negative | 3388383 - 3389594 | 43341.4 |
| glutamine amidotransferase | PLIM_RS13435 | Not Available | Negative | 3389659 - 3390429 | 27962.3 |
| asparagine synthase (glutamine-hydrolyzing) | PLIM_RS13440 | P54420 | Positive | 3390894 - 3392807 | 72598.9 |
| rna polymerase sigma factor | PLIM_RS13445 | Not Available | Negative | 3392844 - 3393437 | 22410.0 |
| ferredoxin family protein | PLIM_RS13450 | P00214 | Positive | 3394051 - 3394335 | 10528.6 |
| hypothetical protein | PLIM_RS13455 | Not Available | Positive | 3394604 - 3395440 | 30855.9 |
| sh3 domain-containing protein | PLIM_RS13460 | Not Available | Positive | 3395647 - 3397386 | 62144.0 |
| rod shape-determining protein | PLIM_RS13465 | P0A9X5 | Positive | 3397445 - 3398491 | 37195.0 |
Pathways
481 pathways
Health Effects
No health effects information available for this bacterium.
