Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | DSM 3776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | PLIM_RS13320 | Not Available | Negative | 3362869 - 3363948 | 38882.8 |
| sua5/ycio/yrdc/ywlc family protein | PLIM_RS22945 | P39155 | Positive | 3364390 - 3365541 | 42107.5 |
| ribose 5-phosphate isomerase b | PLIM_RS13330 | P39156 | Positive | 3365541 - 3365999 | 16734.9 |
| glycine cleavage system protein gcvh | PLIM_RS13335 | Q8A4S8 | Positive | 3366423 - 3366809 | 13707.2 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | PLIM_RS13340 | A4J2F8 | Positive | 3367018 - 3368373 | 48750.9 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpb | PLIM_RS13345 | Q7UNH1 | Positive | 3368519 - 3369994 | 53387.7 |
| lipoate--protein ligase family protein | PLIM_RS13350 | Q8ERL9 | Positive | 3370202 - 3370933 | 27240.6 |
| fha domain-containing protein | PLIM_RS22950 | Not Available | Positive | 3371423 - 3372475 | 36756.5 |
| hypothetical protein | PLIM_RS13360 | Not Available | Positive | 3372705 - 3372914 | 7961.43 |
| rna polymerase sigma factor | PLIM_RS13365 | Q45585 | Positive | 3373011 - 3373580 | 21583.9 |
Pathways
481 pathways
Health Effects
No health effects information available for this bacterium.
