Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | DSM 3776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1559 domain-containing protein | PLIM_RS13125 | Not Available | Positive | 3311805 - 3312875 | 37976.5 |
| alkaline phosphatase family protein | PLIM_RS13130 | Not Available | Negative | 3313039 - 3314004 | 34884.3 |
| alanine--trna ligase | PLIM_RS13135 | Q7UFH9 | Negative | 3314240 - 3316852 | 95217.0 |
| trypsin-like peptidase domain-containing protein | PLIM_RS13140 | Not Available | Negative | 3317010 - 3318569 | 55678.4 |
| recombinase reca | PLIM_RS13145 | Q7UJJ0 | Negative | 3318647 - 3319705 | 37749.9 |
| yebc/pmpr family dna-binding transcriptional regulator | PLIM_RS13150 | A1VC41 | Negative | 3319837 - 3320583 | 26643.7 |
| tetratricopeptide repeat protein | PLIM_RS13155 | Not Available | Negative | 3320743 - 3323157 | 89194.6 |
| hypothetical protein | PLIM_RS22935 | Not Available | Negative | 3323505 - 3324641 | 40966.0 |
| 30s ribosome-binding factor rbfa | PLIM_RS13165 | Q7URR1 | Negative | 3324874 - 3325470 | 21259.4 |
| translation initiation factor if-2 | PLIM_RS13170 | Q7URR0 | Negative | 3325553 - 3328648 | 110817.0 |
Pathways
481 pathways
Health Effects
No health effects information available for this bacterium.
