Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | DSM 3776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rtcb family protein | PLIM_RS12855 | Q5JCZ1 | Negative | 3253306 - 3254838 | 55449.7 |
| duf4304 domain-containing protein | PLIM_RS22925 | Not Available | Negative | 3255088 - 3255732 | 24717.6 |
| hypothetical protein | PLIM_RS12865 | Not Available | Positive | 3255923 - 3256378 | 17249.1 |
| proline--trna ligase | PLIM_RS12870 | B9LZK1 | Negative | 3256552 - 3258324 | 65100.1 |
| glutamate-5-semialdehyde dehydrogenase | PLIM_RS12880 | Q820I7 | Positive | 3258714 - 3259970 | 44579.7 |
| flagellar motor switch protein flim | PLIM_RS12885 | P74927 | Positive | 3260108 - 3261235 | 40782.7 |
| translation initiation factor if-3 | PLIM_RS12890 | Q7UJ17 | Positive | 3261539 - 3262048 | 19403.8 |
| 50s ribosomal protein l35 | PLIM_RS12895 | Not Available | Positive | 3262357 - 3262557 | 7483.33 |
| 50s ribosomal protein l20 | PLIM_RS12900 | Q7UP74 | Positive | 3262672 - 3263064 | 14946.4 |
| phenylalanine--trna ligase subunit alpha | PLIM_RS12905 | Q7UP75 | Positive | 3263317 - 3264321 | 37896.3 |
Pathways
481 pathways
Health Effects
No health effects information available for this bacterium.
