Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | DSM 3776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf502 domain-containing protein | PLIM_RS12565 | Not Available | Positive | 3181986 - 3182705 | 25137.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | PLIM_RS12570 | Q7UWB7 | Negative | 3183092 - 3184984 | 68759.3 |
| polyprenyl synthetase family protein | PLIM_RS12575 | B1XJV9 | Negative | 3185210 - 3186166 | 33857.6 |
| cysteine--trna ligase | PLIM_RS12580 | Q7US70 | Positive | 3186472 - 3188025 | 57487.7 |
| duf4058 family protein | PLIM_RS12585 | Not Available | Positive | 3188065 - 3188907 | 31909.7 |
| crossover junction endodeoxyribonuclease ruvc | PLIM_RS12590 | Q7US71 | Positive | 3188913 - 3189425 | 18215.2 |
| bifunctional serine/threonine-protein kinase/formylglycine-generating enzyme family protein | PLIM_RS22905 | Not Available | Positive | 3189634 - 3192324 | 97797.8 |
| holliday junction branch migration protein ruva | PLIM_RS12600 | Q7USB0 | Positive | 3193040 - 3193663 | 23433.8 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | PLIM_RS12605 | Q31P19 | Negative | 3193712 - 3194188 | 16925.4 |
| pega domain-containing protein | PLIM_RS12610 | Not Available | Positive | 3194327 - 3194755 | 16218.8 |
Pathways
481 pathways
Health Effects
No health effects information available for this bacterium.
