Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | DSM 3776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly atpase sufc | PLIM_RS12305 | P80866 | Positive | 3111922 - 3112767 | 31038.5 |
| fe-s cluster assembly protein sufb | PLIM_RS12310 | O32162 | Positive | 3112918 - 3114339 | 52967.5 |
| fe-s cluster assembly protein sufd | PLIM_RS12315 | Q4L4T1 | Positive | 3114446 - 3115813 | 50384.5 |
| iron-sulfur cluster assembly protein | PLIM_RS23695 | A0A0H2XI17 | Positive | 3115935 - 3116651 | 25645.6 |
| duf3500 domain-containing protein | PLIM_RS12330 | Not Available | Positive | 3116903 - 3117988 | 40249.3 |
| sugar phosphate isomerase/epimerase | PLIM_RS12335 | Not Available | Positive | 3118330 - 3119280 | 35257.2 |
| pts sugar transporter subunit iia | PLIM_RS12340 | Not Available | Positive | 3119691 - 3120398 | 26528.8 |
| pig-l family deacetylase | PLIM_RS12345 | P42981 | Positive | 3120531 - 3121316 | 28383.6 |
| pp2c family serine/threonine-protein phosphatase | PLIM_RS12350 | O34779 | Positive | 3121711 - 3122451 | 26323.3 |
| zinc-dependent metalloprotease | PLIM_RS12360 | Not Available | Positive | 3122923 - 3125514 | 95394.4 |
Pathways
481 pathways
Health Effects
No health effects information available for this bacterium.
